Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
LYSMD3Q7Z3D4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 AC055876.2-201ENST00000531834 546 ntBASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD3Q7Z3D4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 AC084364.1-201ENST00000551967 1556 ntBASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 MEP1AP4-201ENST00000423244 1087 ntBASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 DFFBP1-201ENST00000433250 979 ntBASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 AC244107.1-201ENST00000442033 332 ntBASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 AC036164.1-201ENST00000570544 333 ntBASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 AC105233.6-201ENST00000642093 218 ntBASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 AL009178.2-201ENST00000597278 2719 ntBASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD3Q7Z3D4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD3Q7Z3D4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms