Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 NORAD-201ENST00000565493 5339 ntBASIC16.12■□□□□ 0.17
LRRC38Q5VT99 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 REXO1L4P-201ENST00000605109 1937 ntBASIC16.12■□□□□ 0.17
LRRC38Q5VT99 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 AC097493.3-201ENST00000509725 367 ntBASIC16.12■□□□□ 0.17
LRRC38Q5VT99 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 AP001160.2-201ENST00000596071 487 ntBASIC16.12■□□□□ 0.17
LRRC38Q5VT99 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 AL590560.3-201ENST00000623350 461 ntBASIC16.12■□□□□ 0.17
LRRC38Q5VT99 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 BTBD7P1-201ENST00000447253 1453 ntBASIC16.11■□□□□ 0.17
LRRC38Q5VT99 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 AC004461.2-201ENST00000629517 803 ntBASIC16.11■□□□□ 0.17
LRRC38Q5VT99 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC38Q5VT99 AC100757.3-201ENST00000622361 1406 ntBASIC16.11■□□□□ 0.17
LRRC38Q5VT99 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 AC106881.1-201ENST00000605849 3329 ntBASIC16.1■□□□□ 0.17
LRRC38Q5VT99 AP002414.2-201ENST00000591780 3365 ntBASIC16.1■□□□□ 0.17
LRRC38Q5VT99 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC38Q5VT99 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms