Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
PCP4P48539 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 WDR31-201ENST00000341761 4862 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
PCP4P48539 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 TACC1-211ENST00000520973 2564 ntTSL 2 BASIC10.3□□□□□ -0.76
PCP4P48539 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
PCP4P48539 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.3□□□□□ -0.76
PCP4P48539 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC10.3□□□□□ -0.76
PCP4P48539 CYP4F35P-201ENST00000582957 2876 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC10.3□□□□□ -0.76
PCP4P48539 RAD52-204ENST00000430095 2366 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC10.3□□□□□ -0.76
PCP4P48539 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
PCP4P48539 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PCP4P48539 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
PCP4P48539 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
PCP4P48539 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 ZFYVE27-203ENST00000359980 2997 ntAPPRIS ALT1 TSL 2 BASIC10.29□□□□□ -0.76
PCP4P48539 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 PHGDH-210ENST00000641115 1638 ntBASIC10.29□□□□□ -0.76
PCP4P48539 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 PLA2G6-201ENST00000332509 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 AL021392.1-201ENST00000426112 2949 ntTSL 2 BASIC10.29□□□□□ -0.76
PCP4P48539 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
PCP4P48539 ATP6V0A4-203ENST00000393054 3090 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
PCP4P48539 ZNF221-201ENST00000251269 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
PCP4P48539 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC10.29□□□□□ -0.76
PCP4P48539 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC10.29□□□□□ -0.76
PCP4P48539 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC10.29□□□□□ -0.76
PCP4P48539 AL133380.1-201ENST00000506013 324 ntBASIC10.29□□□□□ -0.76
PCP4P48539 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
PCP4P48539 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 AC015802.1-201ENST00000588104 1449 ntBASIC10.29□□□□□ -0.76
PCP4P48539 MYLKP1-201ENST00000509077 1580 ntBASIC10.29□□□□□ -0.76
PCP4P48539 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
PCP4P48539 AC011498.7-201ENST00000624986 2027 ntBASIC10.29□□□□□ -0.76
PCP4P48539 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
PCP4P48539 ARAP3-205ENST00000513878 3810 ntTSL 2 BASIC10.29□□□□□ -0.76
PCP4P48539 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 LINC00667-205ENST00000582008 3979 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC10.29□□□□□ -0.76
PCP4P48539 ABR-201ENST00000291107 2673 ntTSL 2 BASIC10.29□□□□□ -0.76
PCP4P48539 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
PCP4P48539 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 UNC45A-201ENST00000394275 4002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
PCP4P48539 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
PCP4P48539 AF067845.2-201ENST00000617093 3049 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC10.28□□□□□ -0.76
PCP4P48539 ASNS-203ENST00000394309 2289 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
PCP4P48539 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC10.28□□□□□ -0.76
PCP4P48539 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC10.28□□□□□ -0.76
PCP4P48539 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 RTEL1P1-201ENST00000504490 3685 ntBASIC10.28□□□□□ -0.76
PCP4P48539 SLC18A1-201ENST00000265808 2770 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 DUSP27-203ENST00000443333 4034 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
PCP4P48539 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC10.28□□□□□ -0.76
PCP4P48539 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC10.28□□□□□ -0.76
PCP4P48539 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
PCP4P48539 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC10.28□□□□□ -0.76
PCP4P48539 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
PCP4P48539 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 CNOT3-202ENST00000358389 4118 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 KCNMA1-259ENST00000639406 5567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
PCP4P48539 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
PCP4P48539 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 AC073578.3-201ENST00000624926 4191 ntBASIC10.28□□□□□ -0.76
PCP4P48539 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PCP4P48539 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms