Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.63□□□□□ -0.23
GDNFP39905 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.63□□□□□ -0.23
GDNFP39905 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
GDNFP39905 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.63□□□□□ -0.23
GDNFP39905 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.63□□□□□ -0.23
GDNFP39905 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GDNFP39905 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
GDNFP39905 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
GDNFP39905 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.62□□□□□ -0.23
GDNFP39905 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GDNFP39905 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.62□□□□□ -0.23
GDNFP39905 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.62□□□□□ -0.23
GDNFP39905 AL591424.1-201ENST00000442569 1213 ntBASIC13.62□□□□□ -0.23
GDNFP39905 AC093724.1-201ENST00000448659 1027 ntBASIC13.62□□□□□ -0.23
GDNFP39905 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.62□□□□□ -0.23
GDNFP39905 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.62□□□□□ -0.23
GDNFP39905 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.62□□□□□ -0.23
GDNFP39905 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.62□□□□□ -0.23
GDNFP39905 PDPK2P-202ENST00000562415 1191 ntBASIC13.62□□□□□ -0.23
GDNFP39905 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GDNFP39905 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.62□□□□□ -0.23
GDNFP39905 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.62□□□□□ -0.23
GDNFP39905 AL009183.1-201ENST00000603760 355 ntBASIC13.62□□□□□ -0.23
GDNFP39905 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.62□□□□□ -0.23
GDNFP39905 AC021097.1-201ENST00000607902 574 ntBASIC13.62□□□□□ -0.23
GDNFP39905 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.62□□□□□ -0.23
GDNFP39905 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.62□□□□□ -0.23
GDNFP39905 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
GDNFP39905 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.62□□□□□ -0.23
GDNFP39905 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
GDNFP39905 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.62□□□□□ -0.23
GDNFP39905 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.62□□□□□ -0.23
GDNFP39905 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
GDNFP39905 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
GDNFP39905 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDNFP39905 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
GDNFP39905 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GDNFP39905 BEND3P1-201ENST00000421591 1944 ntBASIC13.61□□□□□ -0.23
GDNFP39905 BX640514.1-201ENST00000583223 1918 ntBASIC13.61□□□□□ -0.23
GDNFP39905 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.61□□□□□ -0.23
GDNFP39905 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
GDNFP39905 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GDNFP39905 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
GDNFP39905 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.61□□□□□ -0.23
GDNFP39905 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.61□□□□□ -0.23
GDNFP39905 AC140658.5-201ENST00000438532 169 ntBASIC13.61□□□□□ -0.23
GDNFP39905 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.61□□□□□ -0.23
GDNFP39905 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.61□□□□□ -0.23
GDNFP39905 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.61□□□□□ -0.23
GDNFP39905 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GDNFP39905 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.61□□□□□ -0.23
GDNFP39905 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
GDNFP39905 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.61□□□□□ -0.23
GDNFP39905 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.61□□□□□ -0.23
GDNFP39905 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GDNFP39905 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GDNFP39905 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms