Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SOX11P35716 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SOX11P35716 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SOX11P35716 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SOX11P35716 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SOX11P35716 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.33■□□□□ 0.04
SOX11P35716 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SOX11P35716 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.33■□□□□ 0.04
SOX11P35716 MIR943-201ENST00000401286 94 ntBASIC15.33■□□□□ 0.04
SOX11P35716 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.33■□□□□ 0.04
SOX11P35716 AC142381.1-201ENST00000426099 345 ntBASIC15.33■□□□□ 0.04
SOX11P35716 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.33■□□□□ 0.04
SOX11P35716 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.33■□□□□ 0.04
SOX11P35716 AC093214.1-201ENST00000511688 1107 ntBASIC15.33■□□□□ 0.04
SOX11P35716 RNA5SP421-201ENST00000516864 134 ntBASIC15.33■□□□□ 0.04
SOX11P35716 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.33■□□□□ 0.04
SOX11P35716 AC140878.1-201ENST00000565277 250 ntBASIC15.33■□□□□ 0.04
SOX11P35716 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.33■□□□□ 0.04
SOX11P35716 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.33■□□□□ 0.04
SOX11P35716 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.33■□□□□ 0.04
SOX11P35716 AC073389.1-201ENST00000595595 795 ntBASIC15.33■□□□□ 0.04
SOX11P35716 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.33■□□□□ 0.04
SOX11P35716 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.33■□□□□ 0.04
SOX11P35716 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SOX11P35716 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SOX11P35716 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SOX11P35716 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SOX11P35716 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SOX11P35716 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SOX11P35716 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SOX11P35716 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SOX11P35716 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SOX11P35716 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SOX11P35716 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.32■□□□□ 0.04
SOX11P35716 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SOX11P35716 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.32■□□□□ 0.04
SOX11P35716 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.32■□□□□ 0.04
SOX11P35716 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.32■□□□□ 0.04
SOX11P35716 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.32■□□□□ 0.04
SOX11P35716 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.32■□□□□ 0.04
SOX11P35716 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
SOX11P35716 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
SOX11P35716 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SOX11P35716 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SOX11P35716 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
SOX11P35716 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.32■□□□□ 0.04
SOX11P35716 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.32■□□□□ 0.04
SOX11P35716 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.32■□□□□ 0.04
SOX11P35716 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.32■□□□□ 0.04
SOX11P35716 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.32■□□□□ 0.04
SOX11P35716 KRT18P34-201ENST00000488218 1270 ntBASIC15.32■□□□□ 0.04
SOX11P35716 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 AC105233.2-201ENST00000523697 349 ntBASIC15.32■□□□□ 0.04
SOX11P35716 AF228730.5-201ENST00000530288 346 ntBASIC15.32■□□□□ 0.04
SOX11P35716 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.32■□□□□ 0.04
SOX11P35716 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.32■□□□□ 0.04
SOX11P35716 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.32■□□□□ 0.04
SOX11P35716 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.32■□□□□ 0.04
SOX11P35716 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.32■□□□□ 0.04
SOX11P35716 MIR6080-201ENST00000617359 66 ntBASIC15.32■□□□□ 0.04
SOX11P35716 AJ011932.1-201ENST00000621707 465 ntBASIC15.32■□□□□ 0.04
SOX11P35716 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.32■□□□□ 0.04
SOX11P35716 C8orf49-201ENST00000525043 1968 ntBASIC15.32■□□□□ 0.04
SOX11P35716 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SOX11P35716 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SOX11P35716 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.32■□□□□ 0.04
SOX11P35716 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX11P35716 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX11P35716 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SOX11P35716 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX11P35716 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SOX11P35716 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX11P35716 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.31■□□□□ 0.04
SOX11P35716 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX11P35716 AC117489.1-201ENST00000625169 3217 ntBASIC15.31■□□□□ 0.04
SOX11P35716 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SOX11P35716 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.31■□□□□ 0.04
SOX11P35716 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX11P35716 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SOX11P35716 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX11P35716 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SOX11P35716 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SOX11P35716 BASP1P1-201ENST00000430708 665 ntBASIC15.31■□□□□ 0.04
SOX11P35716 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms