Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.11■□□□□ 0.17
CD48P09326 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CD48P09326 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.11■□□□□ 0.17
CD48P09326 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CD48P09326 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.11■□□□□ 0.17
CD48P09326 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.11■□□□□ 0.17
CD48P09326 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.11■□□□□ 0.17
CD48P09326 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.11■□□□□ 0.17
CD48P09326 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CD48P09326 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.11■□□□□ 0.17
CD48P09326 AC005498.2-205ENST00000593218 784 ntBASIC16.11■□□□□ 0.17
CD48P09326 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.11■□□□□ 0.17
CD48P09326 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.11■□□□□ 0.17
CD48P09326 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.11■□□□□ 0.17
CD48P09326 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.11■□□□□ 0.17
CD48P09326 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.11■□□□□ 0.17
CD48P09326 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.11■□□□□ 0.17
CD48P09326 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.11■□□□□ 0.17
CD48P09326 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD48P09326 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.1■□□□□ 0.17
CD48P09326 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 AP000845.1-201ENST00000581677 2131 ntBASIC16.1■□□□□ 0.17
CD48P09326 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CD48P09326 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.1■□□□□ 0.17
CD48P09326 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.1■□□□□ 0.17
CD48P09326 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CD48P09326 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 FAM8A3P-201ENST00000427218 844 ntBASIC16.1■□□□□ 0.17
CD48P09326 KRT18P43-201ENST00000469825 1281 ntBASIC16.1■□□□□ 0.17
CD48P09326 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.1■□□□□ 0.17
CD48P09326 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.1■□□□□ 0.17
CD48P09326 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.1■□□□□ 0.17
CD48P09326 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.1■□□□□ 0.17
CD48P09326 AC092337.1-201ENST00000568699 1129 ntBASIC16.1■□□□□ 0.17
CD48P09326 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.1■□□□□ 0.17
CD48P09326 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.1■□□□□ 0.17
CD48P09326 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.1■□□□□ 0.17
CD48P09326 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CD48P09326 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CD48P09326 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD48P09326 AC138969.3-201ENST00000546612 1459 ntBASIC16.1■□□□□ 0.17
CD48P09326 AC138932.2-201ENST00000548268 1459 ntBASIC16.1■□□□□ 0.17
CD48P09326 AC126755.4-201ENST00000549796 1459 ntBASIC16.1■□□□□ 0.17
CD48P09326 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.1■□□□□ 0.17
CD48P09326 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CD48P09326 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 AJ011931.1-201ENST00000618749 2492 ntBASIC16.09■□□□□ 0.17
CD48P09326 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.09■□□□□ 0.17
CD48P09326 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD48P09326 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.09■□□□□ 0.17
CD48P09326 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms