Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 CDC14C-201ENST00000428251 1719 ntBASIC17.33■□□□□ 0.37
CLSTN1O94985 AL136982.4-201ENST00000437689 1740 ntBASIC17.33■□□□□ 0.37
CLSTN1O94985 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLSTN1O94985 REXO1L1P-201ENST00000379010 6598 ntBASIC17.33■□□□□ 0.37
CLSTN1O94985 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLSTN1O94985 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLSTN1O94985 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC17.33■□□□□ 0.37
CLSTN1O94985 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC17.33■□□□□ 0.37
CLSTN1O94985 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 MIR943-201ENST00000401286 94 ntBASIC17.33■□□□□ 0.36
CLSTN1O94985 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.33■□□□□ 0.36
CLSTN1O94985 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.33■□□□□ 0.36
CLSTN1O94985 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.33■□□□□ 0.36
CLSTN1O94985 AL645939.2-201ENST00000427340 991 ntBASIC17.33■□□□□ 0.36
CLSTN1O94985 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.33■□□□□ 0.36
CLSTN1O94985 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.33■□□□□ 0.36
CLSTN1O94985 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.33■□□□□ 0.36
CLSTN1O94985 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.33■□□□□ 0.36
CLSTN1O94985 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.33■□□□□ 0.36
CLSTN1O94985 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.33■□□□□ 0.36
CLSTN1O94985 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.33■□□□□ 0.36
CLSTN1O94985 AC069120.2-201ENST00000524091 540 ntBASIC17.33■□□□□ 0.36
CLSTN1O94985 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.33■□□□□ 0.36
CLSTN1O94985 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.33■□□□□ 0.36
CLSTN1O94985 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.33■□□□□ 0.36
CLSTN1O94985 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.33■□□□□ 0.36
CLSTN1O94985 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.33■□□□□ 0.36
CLSTN1O94985 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLSTN1O94985 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.33■□□□□ 0.36
CLSTN1O94985 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.33■□□□□ 0.36
CLSTN1O94985 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.33■□□□□ 0.36
CLSTN1O94985 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLSTN1O94985 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLSTN1O94985 DKFZP434A062-201ENST00000573103 5021 ntBASIC17.32■□□□□ 0.36
CLSTN1O94985 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.32■□□□□ 0.36
CLSTN1O94985 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLSTN1O94985 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 SLC9A3P3-201ENST00000457608 2229 ntBASIC17.32■□□□□ 0.36
CLSTN1O94985 AC013268.4-201ENST00000637413 2228 ntBASIC17.32■□□□□ 0.36
CLSTN1O94985 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 AP001282.1-201ENST00000531301 1499 ntBASIC17.32■□□□□ 0.36
CLSTN1O94985 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CLSTN1O94985 AL035456.1-201ENST00000456064 1369 ntBASIC17.32■□□□□ 0.36
CLSTN1O94985 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CLSTN1O94985 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.32■□□□□ 0.36
CLSTN1O94985 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.32■□□□□ 0.36
CLSTN1O94985 TREML5P-201ENST00000421694 576 ntBASIC17.32■□□□□ 0.36
CLSTN1O94985 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLSTN1O94985 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.32■□□□□ 0.36
CLSTN1O94985 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.32■□□□□ 0.36
CLSTN1O94985 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.32■□□□□ 0.36
CLSTN1O94985 RN7SL828P-201ENST00000607615 303 ntBASIC17.32■□□□□ 0.36
CLSTN1O94985 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.32■□□□□ 0.36
CLSTN1O94985 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.32■□□□□ 0.36
CLSTN1O94985 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.32■□□□□ 0.36
CLSTN1O94985 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.32■□□□□ 0.36
CLSTN1O94985 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.32■□□□□ 0.36
CLSTN1O94985 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLSTN1O94985 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLSTN1O94985 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms