Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.28■□□□□ 0.04
PEX1O43933 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PEX1O43933 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEX1O43933 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEX1O43933 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEX1O43933 AC015656.1-201ENST00000624209 3578 ntBASIC15.28■□□□□ 0.04
PEX1O43933 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PEX1O43933 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PEX1O43933 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PEX1O43933 WASH6P-202ENST00000359512 1437 ntBASIC15.27■□□□□ 0.04
PEX1O43933 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.27■□□□□ 0.04
PEX1O43933 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.27■□□□□ 0.04
PEX1O43933 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.27■□□□□ 0.04
PEX1O43933 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PEX1O43933 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PEX1O43933 OR2I1P-209ENST00000641730 5365 ntBASIC15.27■□□□□ 0.04
PEX1O43933 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PEX1O43933 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PEX1O43933 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
PEX1O43933 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PEX1O43933 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PEX1O43933 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PEX1O43933 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PEX1O43933 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PEX1O43933 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PEX1O43933 IGHV3-62-201ENST00000520057 340 ntBASIC15.27■□□□□ 0.04
PEX1O43933 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PEX1O43933 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.27■□□□□ 0.04
PEX1O43933 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.27■□□□□ 0.04
PEX1O43933 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PEX1O43933 MIR3909-201ENST00000579518 119 ntBASIC15.27■□□□□ 0.04
PEX1O43933 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.27■□□□□ 0.04
PEX1O43933 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PEX1O43933 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.27■□□□□ 0.04
PEX1O43933 AC009093.7-201ENST00000623853 1223 ntBASIC15.27■□□□□ 0.04
PEX1O43933 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.27■□□□□ 0.04
PEX1O43933 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.27■□□□□ 0.04
PEX1O43933 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.27■□□□□ 0.03
PEX1O43933 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.27■□□□□ 0.03
PEX1O43933 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.27■□□□□ 0.03
PEX1O43933 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
PEX1O43933 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
PEX1O43933 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.27■□□□□ 0.03
PEX1O43933 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.27■□□□□ 0.03
PEX1O43933 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PEX1O43933 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEX1O43933 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.26■□□□□ 0.03
PEX1O43933 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.26■□□□□ 0.03
PEX1O43933 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PEX1O43933 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.26■□□□□ 0.03
PEX1O43933 KRT8P44-201ENST00000441609 1350 ntBASIC15.26■□□□□ 0.03
PEX1O43933 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEX1O43933 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEX1O43933 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEX1O43933 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEX1O43933 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PEX1O43933 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PEX1O43933 AC005252.3-201ENST00000623855 2258 ntBASIC15.26■□□□□ 0.03
PEX1O43933 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PEX1O43933 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.26■□□□□ 0.03
PEX1O43933 SPCS2P4-201ENST00000436160 681 ntBASIC15.26■□□□□ 0.03
PEX1O43933 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.26■□□□□ 0.03
PEX1O43933 AC109322.1-201ENST00000524499 1264 ntBASIC15.26■□□□□ 0.03
PEX1O43933 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.26■□□□□ 0.03
PEX1O43933 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
PEX1O43933 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.26■□□□□ 0.03
PEX1O43933 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.26■□□□□ 0.03
PEX1O43933 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.26■□□□□ 0.03
PEX1O43933 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.26■□□□□ 0.03
PEX1O43933 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.26■□□□□ 0.03
PEX1O43933 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.26■□□□□ 0.03
PEX1O43933 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PEX1O43933 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.26■□□□□ 0.03
PEX1O43933 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEX1O43933 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PEX1O43933 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEX1O43933 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PEX1O43933 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.26■□□□□ 0.03
PEX1O43933 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEX1O43933 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PEX1O43933 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PEX1O43933 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PEX1O43933 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEX1O43933 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.26■□□□□ 0.03
PEX1O43933 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEX1O43933 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.26■□□□□ 0.03
PEX1O43933 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms