Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CREB3O43889 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CREB3O43889 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CREB3O43889 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.3■□□□□ 0.2
CREB3O43889 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CREB3O43889 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CREB3O43889 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.3■□□□□ 0.2
CREB3O43889 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.29■□□□□ 0.2
CREB3O43889 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.29■□□□□ 0.2
CREB3O43889 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CREB3O43889 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.29■□□□□ 0.2
CREB3O43889 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.29■□□□□ 0.2
CREB3O43889 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.29■□□□□ 0.2
CREB3O43889 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.29■□□□□ 0.2
CREB3O43889 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.29■□□□□ 0.2
CREB3O43889 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
CREB3O43889 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.29■□□□□ 0.2
CREB3O43889 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CREB3O43889 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.29■□□□□ 0.2
CREB3O43889 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.29■□□□□ 0.2
CREB3O43889 KRT18P64-201ENST00000434946 1219 ntBASIC16.29■□□□□ 0.2
CREB3O43889 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.29■□□□□ 0.2
CREB3O43889 AC009477.1-201ENST00000452936 217 ntBASIC16.29■□□□□ 0.2
CREB3O43889 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.29■□□□□ 0.2
CREB3O43889 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.29■□□□□ 0.2
CREB3O43889 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.29■□□□□ 0.2
CREB3O43889 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.29■□□□□ 0.2
CREB3O43889 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.29■□□□□ 0.2
CREB3O43889 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CREB3O43889 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.29■□□□□ 0.2
CREB3O43889 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 AC022144.1-201ENST00000602255 1580 ntBASIC16.29■□□□□ 0.2
CREB3O43889 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.29■□□□□ 0.2
CREB3O43889 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.29■□□□□ 0.2
CREB3O43889 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CREB3O43889 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CREB3O43889 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CREB3O43889 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CREB3O43889 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.28■□□□□ 0.2
CREB3O43889 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.28■□□□□ 0.2
CREB3O43889 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.28■□□□□ 0.2
CREB3O43889 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CREB3O43889 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CREB3O43889 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
CREB3O43889 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CREB3O43889 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.28■□□□□ 0.2
CREB3O43889 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CREB3O43889 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.28■□□□□ 0.2
CREB3O43889 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.28■□□□□ 0.2
CREB3O43889 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.28■□□□□ 0.2
CREB3O43889 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.28■□□□□ 0.2
CREB3O43889 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.28■□□□□ 0.2
CREB3O43889 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CREB3O43889 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.28■□□□□ 0.2
CREB3O43889 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.28■□□□□ 0.2
CREB3O43889 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.28■□□□□ 0.2
CREB3O43889 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.28■□□□□ 0.2
CREB3O43889 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CREB3O43889 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.28■□□□□ 0.2
CREB3O43889 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.28■□□□□ 0.2
CREB3O43889 SLED1-202ENST00000512051 380 ntBASIC16.28■□□□□ 0.2
CREB3O43889 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.28■□□□□ 0.2
CREB3O43889 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.28■□□□□ 0.2
CREB3O43889 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CREB3O43889 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.28■□□□□ 0.2
CREB3O43889 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms