Protein–RNA interactions for Protein: O43602

DCX, Neuronal migration protein doublecortin, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCXO43602 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
DCXO43602 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.46■□□□□ 0.23
DCXO43602 RPL13AP25-201ENST00000484130 612 ntBASIC16.46■□□□□ 0.23
DCXO43602 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.46■□□□□ 0.23
DCXO43602 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.46■□□□□ 0.23
DCXO43602 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.46■□□□□ 0.23
DCXO43602 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.46■□□□□ 0.23
DCXO43602 AC124283.3-201ENST00000570869 594 ntBASIC16.46■□□□□ 0.23
DCXO43602 MIR3619-201ENST00000579667 83 ntBASIC16.46■□□□□ 0.23
DCXO43602 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DCXO43602 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.46■□□□□ 0.23
DCXO43602 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.46■□□□□ 0.23
DCXO43602 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
DCXO43602 AC138627.1-207ENST00000641560 1006 ntBASIC16.46■□□□□ 0.23
DCXO43602 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DCXO43602 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DCXO43602 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
DCXO43602 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DCXO43602 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DCXO43602 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.46■□□□□ 0.23
DCXO43602 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
DCXO43602 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
DCXO43602 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.46■□□□□ 0.23
DCXO43602 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
DCXO43602 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.46■□□□□ 0.23
DCXO43602 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DCXO43602 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
DCXO43602 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
DCXO43602 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.45■□□□□ 0.22
DCXO43602 AC092978.1-202ENST00000637590 1327 ntBASIC16.45■□□□□ 0.22
DCXO43602 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
DCXO43602 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
DCXO43602 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
DCXO43602 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.45■□□□□ 0.22
DCXO43602 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.45■□□□□ 0.22
DCXO43602 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 INTS4P2-202ENST00000614726 2019 ntBASIC16.45■□□□□ 0.22
DCXO43602 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
DCXO43602 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
DCXO43602 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 MIR33B-201ENST00000385104 96 ntBASIC16.45■□□□□ 0.22
DCXO43602 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.45■□□□□ 0.22
DCXO43602 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.45■□□□□ 0.22
DCXO43602 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 HIST2H2BC-201ENST00000498492 580 ntBASIC16.45■□□□□ 0.22
DCXO43602 AC106760.1-201ENST00000508690 800 ntBASIC16.45■□□□□ 0.22
DCXO43602 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.45■□□□□ 0.22
DCXO43602 AP006547.1-201ENST00000563435 692 ntBASIC16.45■□□□□ 0.22
DCXO43602 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.45■□□□□ 0.22
DCXO43602 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.45■□□□□ 0.22
DCXO43602 AL049840.4-201ENST00000602422 811 ntBASIC16.45■□□□□ 0.22
DCXO43602 AC005695.3-201ENST00000614522 232 ntBASIC16.45■□□□□ 0.22
DCXO43602 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
DCXO43602 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.45■□□□□ 0.22
DCXO43602 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
DCXO43602 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
DCXO43602 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
DCXO43602 Z97205.2-201ENST00000564697 1639 ntBASIC16.45■□□□□ 0.22
DCXO43602 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
DCXO43602 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DCXO43602 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.44■□□□□ 0.22
DCXO43602 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.44■□□□□ 0.22
DCXO43602 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DCXO43602 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DCXO43602 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.44■□□□□ 0.22
DCXO43602 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
DCXO43602 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DCXO43602 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DCXO43602 RPL17P11-201ENST00000417593 544 ntBASIC16.44■□□□□ 0.22
DCXO43602 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.44■□□□□ 0.22
DCXO43602 HIST3H2BA-201ENST00000436555 524 ntBASIC16.44■□□□□ 0.22
DCXO43602 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.44■□□□□ 0.22
DCXO43602 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DCXO43602 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.44■□□□□ 0.22
DCXO43602 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
DCXO43602 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.44■□□□□ 0.22
DCXO43602 LINC01115-203ENST00000606068 577 ntBASIC16.44■□□□□ 0.22
DCXO43602 AC026740.1-201ENST00000607068 791 ntBASIC16.44■□□□□ 0.22
DCXO43602 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms