Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 PCDHGB8P-201ENST00000502926 1973 ntBASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 AC142381.1-201ENST00000426099 345 ntBASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 AC074386.1-202ENST00000463561 864 ntBASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 AP002472.1-201ENST00000577490 586 ntBASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 AC099522.2-201ENST00000607001 744 ntBASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 Z83851.2-201ENST00000609564 659 ntBASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 AC008267.7-201ENST00000624570 1194 ntBASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2D4Q9Y2X8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 AC084364.1-201ENST00000551967 1556 ntBASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms