Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 WASH4P-201ENST00000564273 1246 ntBASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHA4Q9UN74 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 AC134915.1-201ENST00000426461 574 ntBASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 AC120045.2-201ENST00000567334 178 ntBASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA4Q9UN74 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHA4Q9UN74 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHA4Q9UN74 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.71■□□□□ 0.42
PCDHA4Q9UN74 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHA4Q9UN74 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHA4Q9UN74 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHA4Q9UN74 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.71■□□□□ 0.42
PCDHA4Q9UN74 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 AL359711.2-201ENST00000563105 872 ntBASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 AC124283.3-201ENST00000570869 594 ntBASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 AC093813.1-201ENST00000605066 256 ntBASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 MROH4P-201ENST00000431302 1578 ntBASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA4Q9UN74 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms