Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RIMBP3Q9UFD9 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 OR5BD1P-201ENST00000532527 817 ntBASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 NEK4P3-201ENST00000604859 544 ntBASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 API5-208ENST00000531273 1868 ntTSL 2 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 AL136172.1-201ENST00000598590 1394 ntBASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RIMBP3Q9UFD9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 SLC25A15P1-201ENST00000456738 342 ntBASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 SLC25A15P3-201ENST00000505530 290 ntBASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 HNRNPA1P16-201ENST00000575692 955 ntBASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 HELLS-212ENST00000630929 400 ntTSL 5 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 FTX-216ENST00000638985 1367 ntTSL 5 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 AC008536.3-201ENST00000623282 1599 ntBASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RIMBP3Q9UFD9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 AL512599.1-201ENST00000430724 685 ntBASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 CDCA4P4-201ENST00000435216 680 ntBASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RIMBP3Q9UFD9 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RIMBP3Q9UFD9 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC23.7■■□□□ 1.39
RIMBP3Q9UFD9 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms