Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RPS2P1-201ENST00000434010 821 ntBASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 KRT18P34-201ENST00000488218 1270 ntBASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 AL031432.2-201ENST00000566714 459 ntBASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 AL928711.1-201ENST00000570165 459 ntBASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 AL356488.2-201ENST00000602755 427 ntBASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 AC005593.1-201ENST00000624894 515 ntBASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 RET-205ENST00000615310 4337 ntTSL 5 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 STRCP1-201ENST00000509801 5328 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 AC009090.5-201ENST00000624886 2285 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 AC023024.2-201ENST00000623561 1993 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 AC134407.2-201ENST00000625089 1978 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 ATP6V0CP3-201ENST00000417255 467 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 TSPY19P-201ENST00000418461 509 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 TSPY18P-201ENST00000441642 509 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 AL513480.1-201ENST00000451731 511 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 HS6ST1P1-201ENST00000481504 1234 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 CXCL1P1-201ENST00000502804 216 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 AC073648.2-201ENST00000510116 352 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 OR7E47P-204ENST00000575924 449 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 AC008735.5-201ENST00000623544 497 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms