Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 KATNBL1P4-201ENST00000503545 918 ntBASIC15.79■□□□□ 0.12
PHOX2BQ99453 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PHOX2BQ99453 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PHOX2BQ99453 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.79■□□□□ 0.12
PHOX2BQ99453 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.79■□□□□ 0.12
PHOX2BQ99453 AP000240.1-201ENST00000609910 452 ntBASIC15.79■□□□□ 0.12
PHOX2BQ99453 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PHOX2BQ99453 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHOX2BQ99453 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHOX2BQ99453 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PHOX2BQ99453 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PHOX2BQ99453 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.79■□□□□ 0.12
PHOX2BQ99453 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PHOX2BQ99453 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.79■□□□□ 0.12
PHOX2BQ99453 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PHOX2BQ99453 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PHOX2BQ99453 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.78■□□□□ 0.12
PHOX2BQ99453 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 LINC02012-201ENST00000608206 1725 ntBASIC15.78■□□□□ 0.12
PHOX2BQ99453 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 AC007274.2-201ENST00000421675 662 ntBASIC15.78■□□□□ 0.12
PHOX2BQ99453 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 RPL13P2-201ENST00000440687 659 ntBASIC15.78■□□□□ 0.12
PHOX2BQ99453 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 AC098935.1-201ENST00000446057 611 ntBASIC15.78■□□□□ 0.12
PHOX2BQ99453 FGFR3P1-201ENST00000449999 601 ntBASIC15.78■□□□□ 0.12
PHOX2BQ99453 AC010234.1-201ENST00000494599 870 ntBASIC15.78■□□□□ 0.12
PHOX2BQ99453 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 AP001065.2-201ENST00000617205 644 ntBASIC15.78■□□□□ 0.12
PHOX2BQ99453 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHOX2BQ99453 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PHOX2BQ99453 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHOX2BQ99453 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHOX2BQ99453 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHOX2BQ99453 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 AL021920.2-201ENST00000624828 1351 ntBASIC15.77■□□□□ 0.12
PHOX2BQ99453 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PHOX2BQ99453 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHOX2BQ99453 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHOX2BQ99453 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHOX2BQ99453 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHOX2BQ99453 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHOX2BQ99453 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 AC097065.1-201ENST00000425737 517 ntBASIC15.77■□□□□ 0.12
PHOX2BQ99453 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.77■□□□□ 0.12
PHOX2BQ99453 AP003392.6-201ENST00000607709 325 ntBASIC15.77■□□□□ 0.12
PHOX2BQ99453 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.77■□□□□ 0.11
PHOX2BQ99453 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PHOX2BQ99453 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PHOX2BQ99453 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PHOX2BQ99453 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.77■□□□□ 0.11
PHOX2BQ99453 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PHOX2BQ99453 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PHOX2BQ99453 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms