Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 KRT18P40-201ENST00000599859 1571 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 MBP-201ENST00000354542 575 ntTSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 ALDOAP2-201ENST00000398050 1076 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 TREX1-203ENST00000456089 629 ntTSL 3 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 MESTP3-201ENST00000503460 968 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC097359.3-201ENST00000603982 1210 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 BX322562.1-201ENST00000617004 561 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC104581.1-202ENST00000635932 2618 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 EIF2D-201ENST00000271764 2005 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 RN7SL202P-201ENST00000584410 262 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC022296.3-201ENST00000608823 403 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC133540.1-201ENST00000620845 1019 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC068987.2-201ENST00000565518 896 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC005962.1-201ENST00000584100 773 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AP000322.3-201ENST00000608665 388 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 COQ4-204ENST00000608951 781 ntTSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 MIR7847-201ENST00000610912 103 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AC005746.3-201ENST00000614751 393 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 AL592424.1-201ENST00000563624 1536 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 FUCA1P1-201ENST00000374476 1351 ntBASIC4.55□□□□□ -1.68
HMCN1Q96RW7 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC4.55□□□□□ -1.68
HMCN1Q96RW7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 AC134407.2-201ENST00000625089 1978 ntBASIC4.54□□□□□ -1.68
HMCN1Q96RW7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC4.54□□□□□ -1.68
HMCN1Q96RW7 AC007292.2-201ENST00000593524 1812 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms