Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 AC093724.1-201ENST00000448659 1027 ntBASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 PRYP5-201ENST00000451909 266 ntBASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 AL671277.2-201ENST00000458060 996 ntBASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 AC107918.2-201ENST00000530817 355 ntBASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 AC021097.1-201ENST00000607902 574 ntBASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 AC015802.1-201ENST00000588104 1449 ntBASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
RAB3IPQ96QF0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 AC091607.1-201ENST00000490318 1060 ntBASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 AC064862.7-201ENST00000604520 867 ntBASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RAB3IPQ96QF0 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB3IPQ96QF0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RAB3IPQ96QF0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAB3IPQ96QF0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IPQ96QF0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IPQ96QF0 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RAB3IPQ96QF0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IPQ96QF0 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IPQ96QF0 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IPQ96QF0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB3IPQ96QF0 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB3IPQ96QF0 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IPQ96QF0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IPQ96QF0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms