Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC140912.1-201ENST00000577171 1054 ntBASIC12.92□□□□□ -0.34
GAFA1Q96PS6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 AL662799.1-202ENST00000614205 422 ntBASIC12.92□□□□□ -0.34
GAFA1Q96PS6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.91□□□□□ -0.34
GAFA1Q96PS6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 CICP11-201ENST00000434745 2827 ntBASIC12.91□□□□□ -0.34
GAFA1Q96PS6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 AC023024.2-201ENST00000623561 1993 ntBASIC12.91□□□□□ -0.34
GAFA1Q96PS6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 MYCLP2-201ENST00000449268 967 ntBASIC12.91□□□□□ -0.34
GAFA1Q96PS6 RPL13AP25-201ENST00000484130 612 ntBASIC12.91□□□□□ -0.34
GAFA1Q96PS6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 AC138761.1-201ENST00000584393 385 ntBASIC12.91□□□□□ -0.34
GAFA1Q96PS6 BRI3BPP1-201ENST00000594224 787 ntBASIC12.91□□□□□ -0.34
GAFA1Q96PS6 AC008494.3-201ENST00000606615 944 ntBASIC12.91□□□□□ -0.34
GAFA1Q96PS6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.91□□□□□ -0.34
GAFA1Q96PS6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 DRD5P1-201ENST00000456605 1438 ntBASIC12.9□□□□□ -0.34
GAFA1Q96PS6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GAFA1Q96PS6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms