Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRP3Q96P20 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.04■□□□□ 0.64
NLRP3Q96P20 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRP3Q96P20 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRP3Q96P20 POM121L8P-201ENST00000417732 1281 ntBASIC19.04■□□□□ 0.64
NLRP3Q96P20 POM121L9P-203ENST00000441984 1285 ntBASIC19.04■□□□□ 0.64
NLRP3Q96P20 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.04■□□□□ 0.64
NLRP3Q96P20 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRP3Q96P20 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.04■□□□□ 0.64
NLRP3Q96P20 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.04■□□□□ 0.64
NLRP3Q96P20 RNA5SP423-201ENST00000517127 109 ntBASIC19.04■□□□□ 0.64
NLRP3Q96P20 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.04■□□□□ 0.64
NLRP3Q96P20 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.04■□□□□ 0.64
NLRP3Q96P20 RN7SL713P-201ENST00000582127 302 ntBASIC19.04■□□□□ 0.64
NLRP3Q96P20 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.04■□□□□ 0.64
NLRP3Q96P20 AL451050.2-201ENST00000606967 682 ntBASIC19.04■□□□□ 0.64
NLRP3Q96P20 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.04■□□□□ 0.64
NLRP3Q96P20 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRP3Q96P20 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
NLRP3Q96P20 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.04■□□□□ 0.64
NLRP3Q96P20 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
NLRP3Q96P20 AC127383.1-201ENST00000444697 1800 ntBASIC19.04■□□□□ 0.64
NLRP3Q96P20 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.04■□□□□ 0.64
NLRP3Q96P20 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NLRP3Q96P20 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRP3Q96P20 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NLRP3Q96P20 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRP3Q96P20 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRP3Q96P20 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NLRP3Q96P20 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRP3Q96P20 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRP3Q96P20 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.03■□□□□ 0.64
NLRP3Q96P20 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.03■□□□□ 0.64
NLRP3Q96P20 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NLRP3Q96P20 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 OR10B1P-201ENST00000601666 907 ntBASIC19.03■□□□□ 0.64
NLRP3Q96P20 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRP3Q96P20 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRP3Q96P20 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRP3Q96P20 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRP3Q96P20 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRP3Q96P20 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
NLRP3Q96P20 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NLRP3Q96P20 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NLRP3Q96P20 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NLRP3Q96P20 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
NLRP3Q96P20 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NLRP3Q96P20 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
NLRP3Q96P20 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NLRP3Q96P20 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NLRP3Q96P20 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 AL662890.1-201ENST00000396818 632 ntBASIC19.02■□□□□ 0.64
NLRP3Q96P20 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NLRP3Q96P20 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 AC007663.3-201ENST00000609632 465 ntBASIC19.02■□□□□ 0.64
NLRP3Q96P20 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.02■□□□□ 0.64
NLRP3Q96P20 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NLRP3Q96P20 AL603764.1-201ENST00000636452 321 ntBASIC19.02■□□□□ 0.64
NLRP3Q96P20 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NLRP3Q96P20 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NLRP3Q96P20 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.02■□□□□ 0.64
NLRP3Q96P20 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NLRP3Q96P20 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NLRP3Q96P20 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NLRP3Q96P20 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NLRP3Q96P20 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NLRP3Q96P20 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NLRP3Q96P20 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.02■□□□□ 0.63
NLRP3Q96P20 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NLRP3Q96P20 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms