Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 AL031008.1-201ENST00000619963 541 ntBASIC15.18■□□□□ 0.02
RNF217Q8TC41 FAM215A-202ENST00000632077 792 ntBASIC15.18■□□□□ 0.02
RNF217Q8TC41 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF217Q8TC41 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF217Q8TC41 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 C18orf15-201ENST00000623680 2534 ntBASIC15.17■□□□□ 0.02
RNF217Q8TC41 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 REXO1L8P-201ENST00000604378 1897 ntBASIC15.17■□□□□ 0.02
RNF217Q8TC41 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 AL513480.1-201ENST00000451731 511 ntBASIC15.17■□□□□ 0.02
RNF217Q8TC41 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 AC108751.1-201ENST00000490852 363 ntBASIC15.17■□□□□ 0.02
RNF217Q8TC41 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 AC067750.1-201ENST00000608826 6545 ntBASIC15.17■□□□□ 0.02
RNF217Q8TC41 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF217Q8TC41 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RNF217Q8TC41 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms