Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 AC004461.1-201ENST00000412461 403 ntBASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 AC005237.2-201ENST00000434368 219 ntBASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 AC112482.1-201ENST00000492080 688 ntBASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 RARRES2P9-201ENST00000565168 469 ntBASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 AL607033.1-201ENST00000623900 1599 ntBASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 YBX1P5-201ENST00000509441 847 ntBASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 AL513210.1-201ENST00000629608 234 ntBASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN22Q8N7P3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms