Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 METTL21AP1-201ENST00000438852 635 ntBASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 AC097493.3-201ENST00000509725 367 ntBASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 AL512361.1-201ENST00000554200 418 ntBASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 AC112693.3-201ENST00000624819 1983 ntBASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TTC9CQ8N5M4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 AL109954.1-202ENST00000564051 2148 ntBASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 AC074338.1-201ENST00000416825 156 ntBASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 ZNF890P-202ENST00000530367 1156 ntBASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 AC010336.2-201ENST00000564226 506 ntBASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 AC074044.1-201ENST00000609673 707 ntBASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TTC9CQ8N5M4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AC023157.3-201ENST00000619086 2088 ntBASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms