Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA4Q8IV77 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CNGA4Q8IV77 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA4Q8IV77 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA4Q8IV77 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA4Q8IV77 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
CNGA4Q8IV77 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.95■□□□□ 0.3
CNGA4Q8IV77 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA4Q8IV77 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA4Q8IV77 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CNGA4Q8IV77 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
CNGA4Q8IV77 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA4Q8IV77 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 SPCS2P4-201ENST00000436160 681 ntBASIC16.94■□□□□ 0.3
CNGA4Q8IV77 RNA5SP416-201ENST00000516838 111 ntBASIC16.94■□□□□ 0.3
CNGA4Q8IV77 IGHV3-62-201ENST00000520057 340 ntBASIC16.94■□□□□ 0.3
CNGA4Q8IV77 LINC01225-203ENST00000563550 1244 ntBASIC16.94■□□□□ 0.3
CNGA4Q8IV77 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA4Q8IV77 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 SPDYE11-202ENST00000450699 704 ntBASIC16.93■□□□□ 0.3
CNGA4Q8IV77 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 SPDYE9P-201ENST00000570642 692 ntBASIC16.93■□□□□ 0.3
CNGA4Q8IV77 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 SPDYE10P-202ENST00000612005 668 ntBASIC16.93■□□□□ 0.3
CNGA4Q8IV77 SPDYE8P-202ENST00000612377 668 ntBASIC16.93■□□□□ 0.3
CNGA4Q8IV77 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 AP3S2-216ENST00000617003 1561 ntBASIC16.93■□□□□ 0.3
CNGA4Q8IV77 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNGA4Q8IV77 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms