Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF44Q7L0R7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF44Q7L0R7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF44Q7L0R7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF44Q7L0R7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF44Q7L0R7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF44Q7L0R7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF44Q7L0R7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RNF44Q7L0R7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF44Q7L0R7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 DGCR5-201ENST00000399539 862 ntBASIC14.93□□□□□ -0.02
RNF44Q7L0R7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 AL442647.2-201ENST00000429864 857 ntBASIC14.93□□□□□ -0.02
RNF44Q7L0R7 AP005018.1-201ENST00000525475 301 ntBASIC14.93□□□□□ -0.02
RNF44Q7L0R7 AC092552.1-201ENST00000547243 906 ntBASIC14.93□□□□□ -0.02
RNF44Q7L0R7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 CICP13-201ENST00000422015 2789 ntBASIC14.93□□□□□ -0.02
RNF44Q7L0R7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 AP003680.1-201ENST00000598970 3660 ntBASIC14.93□□□□□ -0.02
RNF44Q7L0R7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
RNF44Q7L0R7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 AC092127.1-201ENST00000567093 3455 ntBASIC14.92□□□□□ -0.02
RNF44Q7L0R7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 AC097376.2-205ENST00000610159 5334 ntBASIC14.92□□□□□ -0.02
RNF44Q7L0R7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 RN7SL692P-201ENST00000464677 288 ntBASIC14.92□□□□□ -0.02
RNF44Q7L0R7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 CTBP2P3-201ENST00000585629 1255 ntBASIC14.92□□□□□ -0.02
RNF44Q7L0R7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 PCDHA3-202ENST00000532566 4594 ntBASIC14.92□□□□□ -0.02
RNF44Q7L0R7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF44Q7L0R7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms