Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 AC148477.4-201ENST00000613430 1793 ntBASIC15.95■□□□□ 0.14
CASC4Q6P4E1 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 AC010327.4-202ENST00000591484 748 ntBASIC15.95■□□□□ 0.14
CASC4Q6P4E1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.95■□□□□ 0.14
CASC4Q6P4E1 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 AC007686.3-201ENST00000619017 3487 ntBASIC15.94■□□□□ 0.14
CASC4Q6P4E1 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 MTND6P24-201ENST00000440466 518 ntBASIC15.94■□□□□ 0.14
CASC4Q6P4E1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 AC097359.3-201ENST00000603982 1210 ntBASIC15.94■□□□□ 0.14
CASC4Q6P4E1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 MST1L-201ENST00000442552 2185 ntBASIC15.94■□□□□ 0.14
CASC4Q6P4E1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CASC4Q6P4E1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms