Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 AC023141.13-201ENST00000604991 943 ntBASIC14.02□□□□□ -0.17
CCDC58Q4VC31 AL161645.1-201ENST00000622716 1255 ntBASIC14.02□□□□□ -0.17
CCDC58Q4VC31 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC58Q4VC31 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 AC148477.4-201ENST00000613430 1793 ntBASIC14.01□□□□□ -0.17
CCDC58Q4VC31 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 BNIP3P1-202ENST00000550043 1585 ntBASIC14.01□□□□□ -0.17
CCDC58Q4VC31 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 HCG4B-203ENST00000450128 991 ntBASIC14.01□□□□□ -0.17
CCDC58Q4VC31 AC098859.1-201ENST00000502915 1238 ntBASIC14.01□□□□□ -0.17
CCDC58Q4VC31 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 UNC93B6-202ENST00000528242 690 ntBASIC14.01□□□□□ -0.17
CCDC58Q4VC31 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC58Q4VC31 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 BEND3P1-201ENST00000421591 1944 ntBASIC14□□□□□ -0.17
CCDC58Q4VC31 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14□□□□□ -0.17
CCDC58Q4VC31 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14□□□□□ -0.17
CCDC58Q4VC31 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms