Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PER3P56645 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
PER3P56645 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.52□□□□□ -0.09
PER3P56645 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PER3P56645 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.52□□□□□ -0.09
PER3P56645 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.52□□□□□ -0.09
PER3P56645 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PER3P56645 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.52□□□□□ -0.09
PER3P56645 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PER3P56645 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PER3P56645 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PER3P56645 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PER3P56645 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PER3P56645 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PER3P56645 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PER3P56645 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PER3P56645 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.51□□□□□ -0.09
PER3P56645 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PER3P56645 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.51□□□□□ -0.09
PER3P56645 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.51□□□□□ -0.09
PER3P56645 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PER3P56645 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.51□□□□□ -0.09
PER3P56645 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PER3P56645 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PER3P56645 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PER3P56645 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.51□□□□□ -0.09
PER3P56645 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.51□□□□□ -0.09
PER3P56645 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.51□□□□□ -0.09
PER3P56645 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.51□□□□□ -0.09
PER3P56645 BANF1P1-201ENST00000553684 263 ntBASIC14.51□□□□□ -0.09
PER3P56645 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.51□□□□□ -0.09
PER3P56645 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.51□□□□□ -0.09
PER3P56645 SRD5A3P1-201ENST00000603021 949 ntBASIC14.51□□□□□ -0.09
PER3P56645 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.51□□□□□ -0.09
PER3P56645 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.51□□□□□ -0.09
PER3P56645 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PER3P56645 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PER3P56645 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PER3P56645 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.51□□□□□ -0.09
PER3P56645 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PER3P56645 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PER3P56645 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.51□□□□□ -0.09
PER3P56645 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.51□□□□□ -0.09
PER3P56645 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
PER3P56645 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.51□□□□□ -0.09
PER3P56645 AL589702.1-201ENST00000641229 1509 ntBASIC14.51□□□□□ -0.09
PER3P56645 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PER3P56645 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.5□□□□□ -0.09
PER3P56645 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.5□□□□□ -0.09
PER3P56645 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PER3P56645 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.5□□□□□ -0.09
PER3P56645 GGT4P-201ENST00000623672 1708 ntBASIC14.5□□□□□ -0.09
PER3P56645 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PER3P56645 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.5□□□□□ -0.09
PER3P56645 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
PER3P56645 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PER3P56645 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
PER3P56645 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PER3P56645 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
PER3P56645 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.5□□□□□ -0.09
PER3P56645 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PER3P56645 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.5□□□□□ -0.09
PER3P56645 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.5□□□□□ -0.09
PER3P56645 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PER3P56645 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.5□□□□□ -0.09
PER3P56645 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PER3P56645 AC104596.2-201ENST00000512793 793 ntBASIC14.5□□□□□ -0.09
PER3P56645 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.5□□□□□ -0.09
PER3P56645 AL512361.1-201ENST00000554200 418 ntBASIC14.5□□□□□ -0.09
PER3P56645 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.5□□□□□ -0.09
PER3P56645 RRP7BP-205ENST00000566851 833 ntBASIC14.5□□□□□ -0.09
PER3P56645 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.5□□□□□ -0.09
PER3P56645 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.5□□□□□ -0.09
PER3P56645 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.5□□□□□ -0.09
PER3P56645 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.5□□□□□ -0.09
PER3P56645 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PER3P56645 AL033527.5-202ENST00000641632 1098 ntBASIC14.5□□□□□ -0.09
PER3P56645 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms