Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH4P55283 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH4P55283 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CDH4P55283 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH4P55283 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH4P55283 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH4P55283 AC004066.1-201ENST00000502488 802 ntBASIC15.85■□□□□ 0.13
CDH4P55283 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CDH4P55283 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH4P55283 AP001063.1-201ENST00000568332 529 ntBASIC15.85■□□□□ 0.13
CDH4P55283 AC009486.1-201ENST00000569860 813 ntBASIC15.85■□□□□ 0.13
CDH4P55283 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH4P55283 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH4P55283 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH4P55283 AC239800.4-201ENST00000603712 296 ntBASIC15.85■□□□□ 0.13
CDH4P55283 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH4P55283 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH4P55283 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDH4P55283 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH4P55283 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH4P55283 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH4P55283 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH4P55283 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDH4P55283 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH4P55283 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 AC136621.1-201ENST00000624017 2304 ntBASIC15.84■□□□□ 0.13
CDH4P55283 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 AC105917.1-201ENST00000506637 2539 ntBASIC15.84■□□□□ 0.13
CDH4P55283 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 ACKR1-201ENST00000368121 1240 ntBASIC15.84■□□□□ 0.13
CDH4P55283 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CDH4P55283 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDH4P55283 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH4P55283 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH4P55283 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 AP001582.1-201ENST00000525856 295 ntBASIC15.84■□□□□ 0.13
CDH4P55283 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CDH4P55283 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 BX539320.1-201ENST00000623759 877 ntBASIC15.84■□□□□ 0.13
CDH4P55283 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH4P55283 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH4P55283 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.84■□□□□ 0.13
CDH4P55283 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDH4P55283 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDH4P55283 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDH4P55283 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH4P55283 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH4P55283 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.83■□□□□ 0.13
CDH4P55283 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.83■□□□□ 0.13
CDH4P55283 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms