Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.13■□□□□ 0.01
PDX1P52945 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.13■□□□□ 0.01
PDX1P52945 PTP4A1P2-201ENST00000546033 454 ntBASIC15.13■□□□□ 0.01
PDX1P52945 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.13■□□□□ 0.01
PDX1P52945 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.13■□□□□ 0.01
PDX1P52945 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.13■□□□□ 0.01
PDX1P52945 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.13■□□□□ 0.01
PDX1P52945 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.13■□□□□ 0.01
PDX1P52945 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
PDX1P52945 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PDX1P52945 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PDX1P52945 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.13■□□□□ 0.01
PDX1P52945 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PDX1P52945 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.13■□□□□ 0.01
PDX1P52945 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.13■□□□□ 0.01
PDX1P52945 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDX1P52945 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.12■□□□□ 0.01
PDX1P52945 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
PDX1P52945 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
PDX1P52945 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDX1P52945 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.12■□□□□ 0.01
PDX1P52945 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDX1P52945 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
PDX1P52945 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDX1P52945 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 C1QBPP1-201ENST00000400117 770 ntBASIC15.12■□□□□ 0.01
PDX1P52945 AC136604.1-201ENST00000418535 575 ntBASIC15.12■□□□□ 0.01
PDX1P52945 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.12■□□□□ 0.01
PDX1P52945 AL355994.2-201ENST00000447882 704 ntBASIC15.12■□□□□ 0.01
PDX1P52945 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.12■□□□□ 0.01
PDX1P52945 RNA5SP412-201ENST00000516234 123 ntBASIC15.12■□□□□ 0.01
PDX1P52945 AP000812.2-201ENST00000538934 718 ntBASIC15.12■□□□□ 0.01
PDX1P52945 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.12■□□□□ 0.01
PDX1P52945 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.12■□□□□ 0.01
PDX1P52945 GPR182-203ENST00000622922 591 ntBASIC15.12■□□□□ 0.01
PDX1P52945 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
PDX1P52945 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.12■□□□□ 0.01
PDX1P52945 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
PDX1P52945 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.12■□□□□ 0.01
PDX1P52945 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PDX1P52945 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDX1P52945 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.11■□□□□ 0.01
PDX1P52945 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.11■□□□□ 0.01
PDX1P52945 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.11■□□□□ 0.01
PDX1P52945 AL162727.3-201ENST00000635661 2787 ntBASIC15.11■□□□□ 0.01
PDX1P52945 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
PDX1P52945 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.11■□□□□ 0.01
PDX1P52945 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
PDX1P52945 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PDX1P52945 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PDX1P52945 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PDX1P52945 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.11■□□□□ 0.01
PDX1P52945 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.11■□□□□ 0.01
PDX1P52945 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.11■□□□□ 0.01
PDX1P52945 RPL13AP25-201ENST00000484130 612 ntBASIC15.11■□□□□ 0.01
PDX1P52945 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms