Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
EFNA3P52797 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.55□□□□□ -0.08
EFNA3P52797 AC090616.6-203ENST00000579186 1945 ntBASIC14.54□□□□□ -0.08
EFNA3P52797 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
EFNA3P52797 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.54□□□□□ -0.08
EFNA3P52797 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.54□□□□□ -0.08
EFNA3P52797 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
EFNA3P52797 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.54□□□□□ -0.08
EFNA3P52797 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.54□□□□□ -0.08
EFNA3P52797 AL162726.2-201ENST00000438986 1017 ntBASIC14.54□□□□□ -0.08
EFNA3P52797 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.54□□□□□ -0.08
EFNA3P52797 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.54□□□□□ -0.08
EFNA3P52797 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.54□□□□□ -0.08
EFNA3P52797 SNX29P1-201ENST00000548357 1007 ntBASIC14.54□□□□□ -0.08
EFNA3P52797 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.54□□□□□ -0.08
EFNA3P52797 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.54□□□□□ -0.08
EFNA3P52797 AL162274.1-201ENST00000617191 1098 ntBASIC14.54□□□□□ -0.08
EFNA3P52797 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.54□□□□□ -0.08
EFNA3P52797 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.54□□□□□ -0.08
EFNA3P52797 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.54□□□□□ -0.08
EFNA3P52797 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.54□□□□□ -0.08
EFNA3P52797 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.54□□□□□ -0.08
EFNA3P52797 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
EFNA3P52797 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.54□□□□□ -0.08
EFNA3P52797 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.54□□□□□ -0.08
EFNA3P52797 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.54□□□□□ -0.08
EFNA3P52797 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.54□□□□□ -0.08
EFNA3P52797 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.54□□□□□ -0.08
EFNA3P52797 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.54□□□□□ -0.08
EFNA3P52797 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.54□□□□□ -0.08
EFNA3P52797 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EFNA3P52797 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.53□□□□□ -0.08
EFNA3P52797 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.53□□□□□ -0.08
EFNA3P52797 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.53□□□□□ -0.08
EFNA3P52797 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
EFNA3P52797 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
EFNA3P52797 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.53□□□□□ -0.08
EFNA3P52797 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.53□□□□□ -0.08
EFNA3P52797 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 ANKRD19P-201ENST00000338192 862 ntBASIC14.53□□□□□ -0.08
EFNA3P52797 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
EFNA3P52797 SOCS2P1-201ENST00000417727 557 ntBASIC14.53□□□□□ -0.08
EFNA3P52797 ACTG1P3-201ENST00000431775 1114 ntBASIC14.53□□□□□ -0.08
EFNA3P52797 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.53□□□□□ -0.08
EFNA3P52797 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.53□□□□□ -0.08
EFNA3P52797 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 ACA64.2-201ENST00000459014 129 ntBASIC14.53□□□□□ -0.08
EFNA3P52797 AC119751.2-201ENST00000504529 210 ntBASIC14.53□□□□□ -0.08
EFNA3P52797 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.53□□□□□ -0.08
EFNA3P52797 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.53□□□□□ -0.08
EFNA3P52797 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.53□□□□□ -0.08
EFNA3P52797 KRT17P8-201ENST00000540749 863 ntBASIC14.53□□□□□ -0.08
EFNA3P52797 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.53□□□□□ -0.08
EFNA3P52797 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.53□□□□□ -0.08
EFNA3P52797 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
EFNA3P52797 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.53□□□□□ -0.08
EFNA3P52797 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
EFNA3P52797 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
EFNA3P52797 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
EFNA3P52797 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.52□□□□□ -0.08
EFNA3P52797 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
EFNA3P52797 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
EFNA3P52797 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
EFNA3P52797 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
EFNA3P52797 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms