Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 AC126365.1-201ENST00000578585 1514 ntBASIC16.23■□□□□ 0.19
MMP13P45452 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.23■□□□□ 0.19
MMP13P45452 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MMP13P45452 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
MMP13P45452 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
MMP13P45452 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.23■□□□□ 0.19
MMP13P45452 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP13P45452 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP13P45452 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP13P45452 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.22■□□□□ 0.19
MMP13P45452 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MMP13P45452 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.22■□□□□ 0.19
MMP13P45452 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MMP13P45452 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MMP13P45452 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP13P45452 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.22■□□□□ 0.19
MMP13P45452 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP13P45452 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MMP13P45452 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP13P45452 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP13P45452 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP13P45452 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MMP13P45452 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MMP13P45452 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.22■□□□□ 0.19
MMP13P45452 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.22■□□□□ 0.19
MMP13P45452 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP13P45452 HIST3H2BA-201ENST00000436555 524 ntBASIC16.22■□□□□ 0.19
MMP13P45452 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MMP13P45452 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.22■□□□□ 0.19
MMP13P45452 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.22■□□□□ 0.19
MMP13P45452 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.22■□□□□ 0.19
MMP13P45452 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.22■□□□□ 0.19
MMP13P45452 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MMP13P45452 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP13P45452 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MMP13P45452 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP13P45452 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP13P45452 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP13P45452 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP13P45452 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP13P45452 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP13P45452 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
MMP13P45452 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP13P45452 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP13P45452 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP13P45452 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
MMP13P45452 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
MMP13P45452 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MMP13P45452 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP13P45452 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
MMP13P45452 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP13P45452 AC092580.3-201ENST00000430932 139 ntBASIC16.21■□□□□ 0.19
MMP13P45452 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP13P45452 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.21■□□□□ 0.19
MMP13P45452 AC097493.3-201ENST00000509725 367 ntBASIC16.21■□□□□ 0.19
MMP13P45452 IGHV3-42-201ENST00000520410 361 ntBASIC16.21■□□□□ 0.19
MMP13P45452 RFPL4AP1-201ENST00000530883 850 ntBASIC16.21■□□□□ 0.19
MMP13P45452 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.21■□□□□ 0.19
MMP13P45452 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP13P45452 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MMP13P45452 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MMP13P45452 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MMP13P45452 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP13P45452 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.18
MMP13P45452 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
MMP13P45452 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MMP13P45452 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.21■□□□□ 0.18
MMP13P45452 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
MMP13P45452 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP13P45452 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP13P45452 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms