Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.08□□□□□ -0.16
APOBEC1P41238 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.08□□□□□ -0.16
APOBEC1P41238 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.08□□□□□ -0.16
APOBEC1P41238 FAM207CP-201ENST00000443486 507 ntBASIC14.08□□□□□ -0.16
APOBEC1P41238 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.08□□□□□ -0.16
APOBEC1P41238 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.08□□□□□ -0.16
APOBEC1P41238 TSPY16P-201ENST00000449843 468 ntBASIC14.08□□□□□ -0.16
APOBEC1P41238 AL589987.1-201ENST00000453380 819 ntBASIC14.08□□□□□ -0.16
APOBEC1P41238 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.08□□□□□ -0.16
APOBEC1P41238 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 AC093004.1-201ENST00000508850 424 ntBASIC14.08□□□□□ -0.16
APOBEC1P41238 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.08□□□□□ -0.16
APOBEC1P41238 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 RRP7BP-205ENST00000566851 833 ntBASIC14.08□□□□□ -0.16
APOBEC1P41238 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.08□□□□□ -0.16
APOBEC1P41238 AC036164.1-201ENST00000570544 333 ntBASIC14.08□□□□□ -0.16
APOBEC1P41238 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
APOBEC1P41238 AL391069.4-201ENST00000609583 481 ntBASIC14.08□□□□□ -0.16
APOBEC1P41238 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.08□□□□□ -0.16
APOBEC1P41238 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
APOBEC1P41238 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
APOBEC1P41238 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.08□□□□□ -0.16
APOBEC1P41238 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.08□□□□□ -0.16
APOBEC1P41238 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
APOBEC1P41238 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.08□□□□□ -0.16
APOBEC1P41238 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.07□□□□□ -0.16
APOBEC1P41238 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
APOBEC1P41238 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.07□□□□□ -0.16
APOBEC1P41238 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.07□□□□□ -0.16
APOBEC1P41238 AC148477.4-201ENST00000613430 1793 ntBASIC14.07□□□□□ -0.16
APOBEC1P41238 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
APOBEC1P41238 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.07□□□□□ -0.16
APOBEC1P41238 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.07□□□□□ -0.16
APOBEC1P41238 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.07□□□□□ -0.16
APOBEC1P41238 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.07□□□□□ -0.16
APOBEC1P41238 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.07□□□□□ -0.16
APOBEC1P41238 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.07□□□□□ -0.16
APOBEC1P41238 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.07□□□□□ -0.16
APOBEC1P41238 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.07□□□□□ -0.16
APOBEC1P41238 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.07□□□□□ -0.16
APOBEC1P41238 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 SPCS2P1-201ENST00000561636 679 ntBASIC14.07□□□□□ -0.16
APOBEC1P41238 AC023824.1-201ENST00000562945 2975 ntBASIC14.07□□□□□ -0.16
APOBEC1P41238 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
APOBEC1P41238 AL355385.1-201ENST00000606123 409 ntBASIC14.07□□□□□ -0.16
APOBEC1P41238 AC025181.2-201ENST00000606994 802 ntBASIC14.07□□□□□ -0.16
APOBEC1P41238 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.07□□□□□ -0.16
APOBEC1P41238 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.07□□□□□ -0.16
APOBEC1P41238 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
APOBEC1P41238 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
APOBEC1P41238 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.07□□□□□ -0.16
APOBEC1P41238 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.07□□□□□ -0.16
APOBEC1P41238 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 TSPY26P-202ENST00000565928 3884 ntBASIC14.07□□□□□ -0.16
APOBEC1P41238 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.07□□□□□ -0.16
APOBEC1P41238 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.07□□□□□ -0.16
APOBEC1P41238 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
APOBEC1P41238 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOBEC1P41238 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms