Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN1P35523 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CLCN1P35523 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN1P35523 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN1P35523 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CLCN1P35523 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLCN1P35523 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN1P35523 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN1P35523 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLCN1P35523 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN1P35523 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
CLCN1P35523 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC17.78■□□□□ 0.44
CLCN1P35523 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLCN1P35523 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.78■□□□□ 0.44
CLCN1P35523 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.78■□□□□ 0.44
CLCN1P35523 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 CICP11-201ENST00000434745 2827 ntBASIC17.78■□□□□ 0.44
CLCN1P35523 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLCN1P35523 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CLCN1P35523 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC17.78■□□□□ 0.44
CLCN1P35523 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLCN1P35523 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.78■□□□□ 0.44
CLCN1P35523 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLCN1P35523 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.78■□□□□ 0.44
CLCN1P35523 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.78■□□□□ 0.44
CLCN1P35523 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.78■□□□□ 0.44
CLCN1P35523 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.78■□□□□ 0.44
CLCN1P35523 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.78■□□□□ 0.44
CLCN1P35523 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 AC010507.1-201ENST00000633895 436 ntBASIC17.78■□□□□ 0.44
CLCN1P35523 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.78■□□□□ 0.44
CLCN1P35523 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.78■□□□□ 0.44
CLCN1P35523 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.78■□□□□ 0.44
CLCN1P35523 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN1P35523 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.78■□□□□ 0.44
CLCN1P35523 AC011477.6-201ENST00000604980 1927 ntBASIC17.78■□□□□ 0.44
CLCN1P35523 AC073869.1-201ENST00000415574 2762 ntBASIC17.78■□□□□ 0.44
CLCN1P35523 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC17.78■□□□□ 0.44
CLCN1P35523 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC17.78■□□□□ 0.44
CLCN1P35523 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
CLCN1P35523 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN1P35523 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLCN1P35523 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CLCN1P35523 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN1P35523 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLCN1P35523 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN1P35523 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN1P35523 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN1P35523 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN1P35523 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLCN1P35523 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN1P35523 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN1P35523 RNU1-129P-201ENST00000384064 167 ntBASIC17.77■□□□□ 0.44
CLCN1P35523 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN1P35523 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
CLCN1P35523 AC096734.2-201ENST00000562054 433 ntBASIC17.77■□□□□ 0.44
CLCN1P35523 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.77■□□□□ 0.44
CLCN1P35523 U1.21-201ENST00000580816 167 ntBASIC17.77■□□□□ 0.44
CLCN1P35523 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.77■□□□□ 0.44
CLCN1P35523 AC104109.2-201ENST00000602919 1418 ntBASIC17.77■□□□□ 0.44
CLCN1P35523 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN1P35523 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.77■□□□□ 0.44
CLCN1P35523 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLCN1P35523 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.77■□□□□ 0.44
CLCN1P35523 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLCN1P35523 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCN1P35523 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CLCN1P35523 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.77■□□□□ 0.43
CLCN1P35523 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCN1P35523 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCN1P35523 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CLCN1P35523 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN1P35523 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN1P35523 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLCN1P35523 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN1P35523 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCN1P35523 IL9RP2-201ENST00000423948 1312 ntBASIC17.76■□□□□ 0.43
CLCN1P35523 INTS4P1-203ENST00000641008 3683 ntBASIC17.76■□□□□ 0.43
CLCN1P35523 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN1P35523 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CLCN1P35523 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCN1P35523 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms