Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC6A4P31645 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A4P31645 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC6A4P31645 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A4P31645 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A4P31645 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
SLC6A4P31645 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC6A4P31645 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC6A4P31645 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC6A4P31645 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A4P31645 AC012441.1-201ENST00000446669 685 ntBASIC15.9■□□□□ 0.14
SLC6A4P31645 BCRP2-202ENST00000447763 634 ntBASIC15.9■□□□□ 0.14
SLC6A4P31645 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC6A4P31645 BCRP6-201ENST00000510112 632 ntBASIC15.9■□□□□ 0.14
SLC6A4P31645 BCRP7-201ENST00000511549 544 ntBASIC15.9■□□□□ 0.14
SLC6A4P31645 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.9■□□□□ 0.14
SLC6A4P31645 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SLC6A4P31645 AC009486.1-201ENST00000569860 813 ntBASIC15.9■□□□□ 0.14
SLC6A4P31645 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC6A4P31645 AL512343.1-201ENST00000605837 169 ntBASIC15.9■□□□□ 0.14
SLC6A4P31645 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A4P31645 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
SLC6A4P31645 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC6A4P31645 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A4P31645 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A4P31645 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A4P31645 AC134312.5-201ENST00000568031 1313 ntBASIC15.9■□□□□ 0.14
SLC6A4P31645 AC093525.8-201ENST00000624099 1342 ntBASIC15.9■□□□□ 0.14
SLC6A4P31645 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A4P31645 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SLC6A4P31645 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
SLC6A4P31645 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC6A4P31645 CICP11-201ENST00000434745 2827 ntBASIC15.89■□□□□ 0.13
SLC6A4P31645 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A4P31645 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC6A4P31645 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SLC6A4P31645 RPL5P21-201ENST00000404620 815 ntBASIC15.89■□□□□ 0.13
SLC6A4P31645 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC6A4P31645 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.89■□□□□ 0.13
SLC6A4P31645 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC6A4P31645 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC6A4P31645 AC022137.2-201ENST00000503482 481 ntBASIC15.89■□□□□ 0.13
SLC6A4P31645 AC106760.1-201ENST00000508690 800 ntBASIC15.89■□□□□ 0.13
SLC6A4P31645 IGHV3-71-201ENST00000523324 359 ntBASIC15.89■□□□□ 0.13
SLC6A4P31645 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC6A4P31645 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A4P31645 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC6A4P31645 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC6A4P31645 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC6A4P31645 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC6A4P31645 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A4P31645 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A4P31645 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC6A4P31645 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC6A4P31645 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC6A4P31645 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A4P31645 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms