Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A1P11836 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A1P11836 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A1P11836 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A1P11836 MROH4P-201ENST00000431302 1578 ntBASIC20.04■□□□□ 0.8
MS4A1P11836 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A1P11836 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A1P11836 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A1P11836 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
MS4A1P11836 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A1P11836 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
MS4A1P11836 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A1P11836 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A1P11836 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
MS4A1P11836 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A1P11836 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A1P11836 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A1P11836 RPL37AP1-201ENST00000412502 279 ntBASIC20.03■□□□□ 0.8
MS4A1P11836 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A1P11836 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A1P11836 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.03■□□□□ 0.8
MS4A1P11836 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.03■□□□□ 0.8
MS4A1P11836 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MS4A1P11836 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MS4A1P11836 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A1P11836 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A1P11836 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A1P11836 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A1P11836 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 TUBB3P1-201ENST00000405796 1332 ntBASIC20.02■□□□□ 0.8
MS4A1P11836 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.02■□□□□ 0.8
MS4A1P11836 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
MS4A1P11836 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
MS4A1P11836 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
MS4A1P11836 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.02■□□□□ 0.8
MS4A1P11836 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.02■□□□□ 0.8
MS4A1P11836 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.02■□□□□ 0.8
MS4A1P11836 SLED1-202ENST00000512051 380 ntBASIC20.02■□□□□ 0.8
MS4A1P11836 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.02■□□□□ 0.8
MS4A1P11836 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.02■□□□□ 0.8
MS4A1P11836 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
MS4A1P11836 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.02■□□□□ 0.8
MS4A1P11836 AC025048.3-201ENST00000590609 569 ntBASIC20.02■□□□□ 0.8
MS4A1P11836 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.02■□□□□ 0.8
MS4A1P11836 AC005702.4-201ENST00000618393 416 ntBASIC20.02■□□□□ 0.8
MS4A1P11836 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
MS4A1P11836 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A1P11836 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
MS4A1P11836 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
MS4A1P11836 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
MS4A1P11836 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC20.02■□□□□ 0.79
MS4A1P11836 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC20.02■□□□□ 0.79
MS4A1P11836 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
MS4A1P11836 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MS4A1P11836 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A1P11836 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A1P11836 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.01■□□□□ 0.79
MS4A1P11836 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
MS4A1P11836 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MS4A1P11836 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
MS4A1P11836 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.01■□□□□ 0.79
MS4A1P11836 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A1P11836 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
MS4A1P11836 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A1P11836 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A1P11836 AL139400.1-201ENST00000366220 510 ntBASIC20.01■□□□□ 0.79
MS4A1P11836 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.01■□□□□ 0.79
MS4A1P11836 AC067863.1-201ENST00000494933 530 ntBASIC20.01■□□□□ 0.79
MS4A1P11836 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.01■□□□□ 0.79
MS4A1P11836 AC004449.1-201ENST00000564240 433 ntBASIC20.01■□□□□ 0.79
MS4A1P11836 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC20.01■□□□□ 0.79
MS4A1P11836 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC20.01■□□□□ 0.79
MS4A1P11836 FGD5P1-202ENST00000614866 2498 ntBASIC20.01■□□□□ 0.79
MS4A1P11836 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
MS4A1P11836 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A1P11836 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC20.01■□□□□ 0.79
MS4A1P11836 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A1P11836 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A1P11836 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC20.01■□□□□ 0.79
MS4A1P11836 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
MS4A1P11836 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A1P11836 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MS4A1P11836 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms