Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-ND3P03897 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
MT-ND3P03897 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.96■□□□□ 0.14
MT-ND3P03897 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MT-ND3P03897 BNIP3P1-202ENST00000550043 1585 ntBASIC15.96■□□□□ 0.14
MT-ND3P03897 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 AC148477.4-201ENST00000613430 1793 ntBASIC15.95■□□□□ 0.14
MT-ND3P03897 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-ND3P03897 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
MT-ND3P03897 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MT-ND3P03897 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-ND3P03897 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
MT-ND3P03897 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 REXO1L1P-202ENST00000608646 1974 ntBASIC15.95■□□□□ 0.14
MT-ND3P03897 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
MT-ND3P03897 AC026748.1-201ENST00000624349 3251 ntBASIC15.95■□□□□ 0.14
MT-ND3P03897 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
MT-ND3P03897 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.95■□□□□ 0.14
MT-ND3P03897 KRT18P32-201ENST00000424695 1287 ntBASIC15.95■□□□□ 0.14
MT-ND3P03897 FAM8A3P-201ENST00000427218 844 ntBASIC15.95■□□□□ 0.14
MT-ND3P03897 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.95■□□□□ 0.14
MT-ND3P03897 AC109322.1-201ENST00000524499 1264 ntBASIC15.95■□□□□ 0.14
MT-ND3P03897 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.95■□□□□ 0.14
MT-ND3P03897 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-ND3P03897 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
MT-ND3P03897 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-ND3P03897 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND3P03897 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.94■□□□□ 0.14
MT-ND3P03897 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND3P03897 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.94■□□□□ 0.14
MT-ND3P03897 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
MT-ND3P03897 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
MT-ND3P03897 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND3P03897 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND3P03897 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
MT-ND3P03897 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 CNN2P2-201ENST00000443536 909 ntBASIC15.94■□□□□ 0.14
MT-ND3P03897 CNN2P3-201ENST00000450201 906 ntBASIC15.94■□□□□ 0.14
MT-ND3P03897 AC069335.1-201ENST00000489972 472 ntBASIC15.94■□□□□ 0.14
MT-ND3P03897 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.94■□□□□ 0.14
MT-ND3P03897 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.94■□□□□ 0.14
MT-ND3P03897 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.94■□□□□ 0.14
MT-ND3P03897 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.94■□□□□ 0.14
MT-ND3P03897 AC093512.1-201ENST00000617969 520 ntBASIC15.94■□□□□ 0.14
MT-ND3P03897 AL136317.3-201ENST00000618497 906 ntBASIC15.94■□□□□ 0.14
MT-ND3P03897 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.94■□□□□ 0.14
MT-ND3P03897 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND3P03897 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
MT-ND3P03897 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
MT-ND3P03897 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND3P03897 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.94■□□□□ 0.14
MT-ND3P03897 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND3P03897 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
MT-ND3P03897 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND3P03897 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
MT-ND3P03897 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND3P03897 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
MT-ND3P03897 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
MT-ND3P03897 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms