Protein–RNA interactions for Protein: O94855

SEC24D, Protein transport protein Sec24D, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24DO94855 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SEC24DO94855 AL109954.1-202ENST00000564051 2148 ntBASIC15.31■□□□□ 0.04
SEC24DO94855 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SEC24DO94855 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC24DO94855 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SEC24DO94855 HLA-H-201ENST00000383620 1096 ntBASIC15.31■□□□□ 0.04
SEC24DO94855 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.31■□□□□ 0.04
SEC24DO94855 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.31■□□□□ 0.04
SEC24DO94855 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.31■□□□□ 0.04
SEC24DO94855 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.31■□□□□ 0.04
SEC24DO94855 AC093214.1-201ENST00000511688 1107 ntBASIC15.31■□□□□ 0.04
SEC24DO94855 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.31■□□□□ 0.04
SEC24DO94855 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.31■□□□□ 0.04
SEC24DO94855 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.31■□□□□ 0.04
SEC24DO94855 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.31■□□□□ 0.04
SEC24DO94855 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC24DO94855 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SEC24DO94855 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC24DO94855 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SEC24DO94855 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC24DO94855 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SEC24DO94855 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SEC24DO94855 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
SEC24DO94855 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC24DO94855 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SEC24DO94855 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC24DO94855 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.31■□□□□ 0.04
SEC24DO94855 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
SEC24DO94855 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.31■□□□□ 0.04
SEC24DO94855 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SEC24DO94855 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.3■□□□□ 0.04
SEC24DO94855 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SEC24DO94855 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC24DO94855 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SEC24DO94855 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SEC24DO94855 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SEC24DO94855 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SEC24DO94855 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SEC24DO94855 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.3■□□□□ 0.04
SEC24DO94855 TREML5P-201ENST00000421694 576 ntBASIC15.3■□□□□ 0.04
SEC24DO94855 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.3■□□□□ 0.04
SEC24DO94855 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.3■□□□□ 0.04
SEC24DO94855 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC24DO94855 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.3■□□□□ 0.04
SEC24DO94855 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC24DO94855 RNA5SP410-201ENST00000516285 106 ntBASIC15.3■□□□□ 0.04
SEC24DO94855 IGHV3-42-201ENST00000520410 361 ntBASIC15.3■□□□□ 0.04
SEC24DO94855 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.3■□□□□ 0.04
SEC24DO94855 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.3■□□□□ 0.04
SEC24DO94855 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC24DO94855 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.3■□□□□ 0.04
SEC24DO94855 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SEC24DO94855 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC24DO94855 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.3■□□□□ 0.04
SEC24DO94855 AL390955.2-201ENST00000603032 514 ntBASIC15.3■□□□□ 0.04
SEC24DO94855 AC018529.1-201ENST00000613063 361 ntBASIC15.3■□□□□ 0.04
SEC24DO94855 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.3■□□□□ 0.04
SEC24DO94855 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEC24DO94855 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms