Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 RNA5SP421-201ENST00000516864 134 ntBASIC13.89□□□□□ -0.19
TRAF3IP2O43734 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 AC104794.3-201ENST00000566840 1248 ntBASIC13.89□□□□□ -0.19
TRAF3IP2O43734 AC000095.1-201ENST00000603208 874 ntBASIC13.89□□□□□ -0.19
TRAF3IP2O43734 AL391069.4-201ENST00000609583 481 ntBASIC13.89□□□□□ -0.19
TRAF3IP2O43734 AL158212.4-201ENST00000624062 1286 ntBASIC13.89□□□□□ -0.19
TRAF3IP2O43734 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF3IP2O43734 AL596257.1-201ENST00000641463 2694 ntBASIC13.88□□□□□ -0.19
TRAF3IP2O43734 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 LINC00554-201ENST00000564841 3011 ntBASIC13.88□□□□□ -0.19
TRAF3IP2O43734 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.88□□□□□ -0.19
TRAF3IP2O43734 MEIS3P1-201ENST00000495167 958 ntBASIC13.88□□□□□ -0.19
TRAF3IP2O43734 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.88□□□□□ -0.19
TRAF3IP2O43734 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.88□□□□□ -0.19
TRAF3IP2O43734 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.88□□□□□ -0.19
TRAF3IP2O43734 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.88□□□□□ -0.19
TRAF3IP2O43734 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF3IP2O43734 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 AC148477.4-201ENST00000613430 1793 ntBASIC13.87□□□□□ -0.19
TRAF3IP2O43734 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 MIR770-201ENST00000390219 98 ntBASIC13.87□□□□□ -0.19
TRAF3IP2O43734 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF3IP2O43734 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms