Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC188H7C350 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC188H7C350 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC188H7C350 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC188H7C350 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC188H7C350 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CCDC188H7C350 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCDC188H7C350 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
CCDC188H7C350 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCDC188H7C350 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC188H7C350 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 MRPL3P1-201ENST00000400109 1033 ntBASIC16.21■□□□□ 0.19
CCDC188H7C350 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC188H7C350 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.21■□□□□ 0.19
CCDC188H7C350 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC188H7C350 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.21■□□□□ 0.19
CCDC188H7C350 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC188H7C350 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCDC188H7C350 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.21■□□□□ 0.19
CCDC188H7C350 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC188H7C350 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCDC188H7C350 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC188H7C350 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC188H7C350 AL513190.1-201ENST00000621254 727 ntBASIC16.21■□□□□ 0.19
CCDC188H7C350 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CCDC188H7C350 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CCDC188H7C350 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCDC188H7C350 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC188H7C350 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC188H7C350 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
CCDC188H7C350 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.21■□□□□ 0.18
CCDC188H7C350 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC188H7C350 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
CCDC188H7C350 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC188H7C350 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC188H7C350 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC188H7C350 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC188H7C350 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC188H7C350 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC188H7C350 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC188H7C350 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC188H7C350 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC188H7C350 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC188H7C350 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC188H7C350 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC188H7C350 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CCDC188H7C350 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC188H7C350 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC188H7C350 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC188H7C350 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC188H7C350 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.2■□□□□ 0.18
CCDC188H7C350 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC188H7C350 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.2■□□□□ 0.18
CCDC188H7C350 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
CCDC188H7C350 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC188H7C350 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC188H7C350 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC188H7C350 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC188H7C350 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCDC188H7C350 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC188H7C350 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC188H7C350 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
CCDC188H7C350 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC188H7C350 AC104109.2-201ENST00000602919 1418 ntBASIC16.19■□□□□ 0.18
CCDC188H7C350 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 HSPA7-201ENST00000445535 1927 ntBASIC16.19■□□□□ 0.18
CCDC188H7C350 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC188H7C350 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CCDC188H7C350 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC188H7C350 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC188H7C350 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CCDC188H7C350 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC188H7C350 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC188H7C350 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC188H7C350 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CCDC188H7C350 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms