Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 AC015922.1-201ENST00000421102 1152 ntBASIC14.35□□□□□ -0.11
CDHR4A6H8M9 KRT18P64-201ENST00000434946 1219 ntBASIC14.35□□□□□ -0.11
CDHR4A6H8M9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 RN7SL618P-201ENST00000477850 296 ntBASIC14.35□□□□□ -0.11
CDHR4A6H8M9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 AC069120.2-201ENST00000524091 540 ntBASIC14.35□□□□□ -0.11
CDHR4A6H8M9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 AC140878.1-201ENST00000565277 250 ntBASIC14.35□□□□□ -0.11
CDHR4A6H8M9 AC015910.1-201ENST00000579400 975 ntBASIC14.35□□□□□ -0.11
CDHR4A6H8M9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 AP001160.2-201ENST00000596071 487 ntBASIC14.35□□□□□ -0.11
CDHR4A6H8M9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDHR4A6H8M9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.34□□□□□ -0.11
CDHR4A6H8M9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 AL133267.1-201ENST00000398220 340 ntBASIC14.34□□□□□ -0.11
CDHR4A6H8M9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 AC107890.1-201ENST00000422478 521 ntBASIC14.34□□□□□ -0.11
CDHR4A6H8M9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 AC074044.1-201ENST00000609673 707 ntBASIC14.34□□□□□ -0.11
CDHR4A6H8M9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDHR4A6H8M9 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms