Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 AC026396.1-201ENST00000419388 421 ntBASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 KRT18P3-201ENST00000451602 1288 ntBASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 AC112693.3-201ENST00000624819 1983 ntBASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB4Q9UN71 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGB4Q9UN71 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
PCDHGB4Q9UN71 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.21■□□□□ 0.02
PCDHGB4Q9UN71 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGB4Q9UN71 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGB4Q9UN71 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.21■□□□□ 0.02
PCDHGB4Q9UN71 AC107918.4-201ENST00000641966 3141 ntBASIC15.21■□□□□ 0.02
PCDHGB4Q9UN71 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
PCDHGB4Q9UN71 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGB4Q9UN71 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGB4Q9UN71 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
PCDHGB4Q9UN71 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 MED15P5-201ENST00000423150 992 ntBASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 FAM86C2P-203ENST00000528684 1004 ntBASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 AC073389.1-201ENST00000595595 795 ntBASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 AL513190.1-201ENST00000621254 727 ntBASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 AC013726.1-201ENST00000563747 2285 ntBASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB4Q9UN71 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 AC090616.6-203ENST00000579186 1945 ntBASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB4Q9UN71 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms