Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 REXO1L1P-202ENST00000608646 1974 ntBASIC13.24□□□□□ -0.29
CLN8Q9UBY8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 LINC02084-201ENST00000606069 1096 ntBASIC13.24□□□□□ -0.29
CLN8Q9UBY8 AC074044.1-201ENST00000609673 707 ntBASIC13.24□□□□□ -0.29
CLN8Q9UBY8 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.24□□□□□ -0.29
CLN8Q9UBY8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 PPT1-215ENST00000641471 2368 ntBASIC13.24□□□□□ -0.29
CLN8Q9UBY8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLN8Q9UBY8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 AZGP1P1-201ENST00000411909 902 ntBASIC13.23□□□□□ -0.29
CLN8Q9UBY8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 TIMM17BP1-201ENST00000545713 516 ntBASIC13.23□□□□□ -0.29
CLN8Q9UBY8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CLN8Q9UBY8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.22□□□□□ -0.29
CLN8Q9UBY8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLN8Q9UBY8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLN8Q9UBY8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms