Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 CICP13-201ENST00000422015 2789 ntBASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP6V0A4Q9HBG4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 AC092127.1-201ENST00000567093 3455 ntBASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A4Q9HBG4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 RPS2P32-201ENST00000439199 892 ntBASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms