Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.7□□□□□ -0.22
ELL3Q9HB65 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ELL3Q9HB65 ELL2P1-201ENST00000413990 1906 ntBASIC13.7□□□□□ -0.22
ELL3Q9HB65 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ELL3Q9HB65 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ELL3Q9HB65 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ELL3Q9HB65 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ELL3Q9HB65 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
ELL3Q9HB65 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 AC006058.4-201ENST00000624016 1670 ntBASIC13.69□□□□□ -0.22
ELL3Q9HB65 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 AL109954.1-202ENST00000564051 2148 ntBASIC13.69□□□□□ -0.22
ELL3Q9HB65 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 SPDYE11-202ENST00000450699 704 ntBASIC13.69□□□□□ -0.22
ELL3Q9HB65 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 AC098859.1-201ENST00000502915 1238 ntBASIC13.69□□□□□ -0.22
ELL3Q9HB65 RNA5SP410-201ENST00000516285 106 ntBASIC13.69□□□□□ -0.22
ELL3Q9HB65 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 AL138918.1-201ENST00000568306 659 ntBASIC13.69□□□□□ -0.22
ELL3Q9HB65 SPDYE9P-201ENST00000570642 692 ntBASIC13.69□□□□□ -0.22
ELL3Q9HB65 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 SPDYE10P-202ENST00000612005 668 ntBASIC13.69□□□□□ -0.22
ELL3Q9HB65 SPDYE8P-202ENST00000612377 668 ntBASIC13.69□□□□□ -0.22
ELL3Q9HB65 SPTSSB-204ENST00000617024 1292 ntBASIC13.69□□□□□ -0.22
ELL3Q9HB65 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.69□□□□□ -0.22
ELL3Q9HB65 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
ELL3Q9HB65 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.69□□□□□ -0.22
ELL3Q9HB65 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ELL3Q9HB65 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 AC018892.3-201ENST00000623986 2499 ntBASIC13.68□□□□□ -0.22
ELL3Q9HB65 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms