Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 AC097493.3-201ENST00000509725 367 ntBASIC14.91□□□□□ -0.02
BRF2Q9HAW0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 AC011467.4-201ENST00000594891 528 ntBASIC14.91□□□□□ -0.02
BRF2Q9HAW0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 AC063926.3-201ENST00000624734 5658 ntBASIC14.91□□□□□ -0.02
BRF2Q9HAW0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 AC099063.4-201ENST00000641099 1602 ntBASIC14.91□□□□□ -0.02
BRF2Q9HAW0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRF2Q9HAW0 AL121723.1-201ENST00000445194 1519 ntBASIC14.91□□□□□ -0.02
BRF2Q9HAW0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 AL844908.2-201ENST00000609461 460 ntBASIC14.9□□□□□ -0.02
BRF2Q9HAW0 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.9□□□□□ -0.02
BRF2Q9HAW0 AC093028.1-201ENST00000622998 982 ntBASIC14.9□□□□□ -0.02
BRF2Q9HAW0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 CICP11-201ENST00000434745 2827 ntBASIC14.9□□□□□ -0.02
BRF2Q9HAW0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 AC100757.3-201ENST00000622361 1406 ntBASIC14.9□□□□□ -0.02
BRF2Q9HAW0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRF2Q9HAW0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms