Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 WASH3P-207ENST00000560956 1394 ntBASIC19.21■□□□□ 0.67
UPF2Q9HAU5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 FO538757.1-201ENST00000623083 1397 ntBASIC19.21■□□□□ 0.67
UPF2Q9HAU5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 FAM8A3P-201ENST00000427218 844 ntBASIC19.21■□□□□ 0.67
UPF2Q9HAU5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 PHKG1P2-201ENST00000457537 863 ntBASIC19.21■□□□□ 0.67
UPF2Q9HAU5 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF2Q9HAU5 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC19.21■□□□□ 0.66
UPF2Q9HAU5 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 KRT8P37-201ENST00000451609 1420 ntBASIC19.2■□□□□ 0.66
UPF2Q9HAU5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 AL773604.1-201ENST00000617417 272 ntBASIC19.2■□□□□ 0.66
UPF2Q9HAU5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC19.2■□□□□ 0.66
UPF2Q9HAU5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 AC002056.1-201ENST00000395613 760 ntBASIC19.19■□□□□ 0.66
UPF2Q9HAU5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 EMBP1-201ENST00000458200 901 ntBASIC19.19■□□□□ 0.66
UPF2Q9HAU5 AC093909.1-201ENST00000504731 1122 ntBASIC19.19■□□□□ 0.66
UPF2Q9HAU5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms