Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 FLJ16779-201ENST00000612722 7638 ntBASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 AL645937.2-201ENST00000396808 931 ntBASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 AC004066.1-201ENST00000502488 802 ntBASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 AC068587.3-201ENST00000526613 355 ntBASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 CLUHP6-201ENST00000580789 941 ntBASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 AL022328.1-201ENST00000610050 478 ntBASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 BX539320.1-201ENST00000623759 877 ntBASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.13■□□□□ 0.17
CDK5RAP1Q96SZ6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 AC005229.1-201ENST00000392885 409 ntBASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 AL355864.2-201ENST00000447420 863 ntBASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 AP005019.2-201ENST00000615104 511 ntBASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 RPSAP52-203ENST00000622976 1023 ntBASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 AC005252.2-201ENST00000624630 1141 ntBASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.12■□□□□ 0.17
CDK5RAP1Q96SZ6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms