Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 ACE3P-201ENST00000423435 1973 ntBASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 AC004870.1-201ENST00000315132 882 ntBASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 DUSP5P1-201ENST00000441325 1139 ntBASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 AL121912.1-201ENST00000603683 238 ntBASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
CHMP6Q96FZ7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 CICP17-201ENST00000418553 2377 ntBASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP6Q96FZ7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP6Q96FZ7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms