Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 AC007274.1-201ENST00000439805 662 ntBASIC16.49■□□□□ 0.23
ATP2A3Q93084 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 AL691432.1-201ENST00000596308 1422 ntBASIC16.49■□□□□ 0.23
ATP2A3Q93084 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 Z97205.2-201ENST00000564697 1639 ntBASIC16.48■□□□□ 0.23
ATP2A3Q93084 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 AC092384.3-202ENST00000564646 2873 ntBASIC16.48■□□□□ 0.23
ATP2A3Q93084 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 LINC02447-202ENST00000501888 2146 ntBASIC16.48■□□□□ 0.23
ATP2A3Q93084 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 MIR648-201ENST00000385046 94 ntBASIC16.48■□□□□ 0.23
ATP2A3Q93084 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 TTTY23B-201ENST00000442790 549 ntBASIC16.48■□□□□ 0.23
ATP2A3Q93084 EEF1DP4-201ENST00000446006 880 ntBASIC16.48■□□□□ 0.23
ATP2A3Q93084 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 RN7SL837P-201ENST00000463010 287 ntBASIC16.48■□□□□ 0.23
ATP2A3Q93084 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 AC104596.2-201ENST00000512793 793 ntBASIC16.48■□□□□ 0.23
ATP2A3Q93084 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 HILS1-202ENST00000545329 423 ntBASIC16.48■□□□□ 0.23
ATP2A3Q93084 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 RARRES2P5-201ENST00000564013 466 ntBASIC16.48■□□□□ 0.23
ATP2A3Q93084 AC106886.1-201ENST00000568660 600 ntBASIC16.48■□□□□ 0.23
ATP2A3Q93084 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 CTBP2P3-201ENST00000585629 1255 ntBASIC16.48■□□□□ 0.23
ATP2A3Q93084 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A3Q93084 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A3Q93084 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 KRT8P37-201ENST00000451609 1420 ntBASIC16.47■□□□□ 0.23
ATP2A3Q93084 OR2I1P-209ENST00000641730 5365 ntBASIC16.47■□□□□ 0.23
ATP2A3Q93084 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms