Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 AC073413.1-201ENST00000603927 732 ntBASIC20.78■□□□□ 0.92
NME9Q86XW9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC20.78■□□□□ 0.92
NME9Q86XW9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.78■□□□□ 0.92
NME9Q86XW9 AL645728.2-202ENST00000641679 227 ntBASIC20.78■□□□□ 0.92
NME9Q86XW9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NME9Q86XW9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.78■□□□□ 0.92
NME9Q86XW9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME9Q86XW9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.77■□□□□ 0.92
NME9Q86XW9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME9Q86XW9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC20.77■□□□□ 0.92
NME9Q86XW9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NME9Q86XW9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME9Q86XW9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.77■□□□□ 0.92
NME9Q86XW9 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME9Q86XW9 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME9Q86XW9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME9Q86XW9 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC20.77■□□□□ 0.92
NME9Q86XW9 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME9Q86XW9 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.77■□□□□ 0.92
NME9Q86XW9 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NME9Q86XW9 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC20.77■□□□□ 0.92
NME9Q86XW9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.77■□□□□ 0.92
NME9Q86XW9 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NME9Q86XW9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME9Q86XW9 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NME9Q86XW9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME9Q86XW9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.77■□□□□ 0.92
NME9Q86XW9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NME9Q86XW9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.77■□□□□ 0.91
NME9Q86XW9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC20.77■□□□□ 0.91
NME9Q86XW9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
NME9Q86XW9 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
NME9Q86XW9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NME9Q86XW9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
NME9Q86XW9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
NME9Q86XW9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NME9Q86XW9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.76■□□□□ 0.91
NME9Q86XW9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
NME9Q86XW9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NME9Q86XW9 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 MIR663B-201ENST00000408361 115 ntBASIC20.76■□□□□ 0.91
NME9Q86XW9 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC20.76■□□□□ 0.91
NME9Q86XW9 FAM8A4P-201ENST00000435433 1213 ntBASIC20.76■□□□□ 0.91
NME9Q86XW9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.76■□□□□ 0.91
NME9Q86XW9 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC20.76■□□□□ 0.91
NME9Q86XW9 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC20.76■□□□□ 0.91
NME9Q86XW9 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.76■□□□□ 0.91
NME9Q86XW9 AL391280.1-201ENST00000506969 1062 ntBASIC20.76■□□□□ 0.91
NME9Q86XW9 COX5BP1-201ENST00000507622 393 ntBASIC20.76■□□□□ 0.91
NME9Q86XW9 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.76■□□□□ 0.91
NME9Q86XW9 ACTG1P17-201ENST00000558391 1119 ntBASIC20.76■□□□□ 0.91
NME9Q86XW9 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NME9Q86XW9 OR10B1P-201ENST00000601666 907 ntBASIC20.76■□□□□ 0.91
NME9Q86XW9 AC068587.10-201ENST00000641210 219 ntBASIC20.76■□□□□ 0.91
NME9Q86XW9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NME9Q86XW9 REXO1L5P-201ENST00000622260 2098 ntBASIC20.76■□□□□ 0.91
NME9Q86XW9 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.76■□□□□ 0.91
NME9Q86XW9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME9Q86XW9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME9Q86XW9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.75■□□□□ 0.91
NME9Q86XW9 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME9Q86XW9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME9Q86XW9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME9Q86XW9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NME9Q86XW9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NME9Q86XW9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME9Q86XW9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME9Q86XW9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NME9Q86XW9 MST1L-201ENST00000442552 2185 ntBASIC20.75■□□□□ 0.91
NME9Q86XW9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NME9Q86XW9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
NME9Q86XW9 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME9Q86XW9 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME9Q86XW9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.75■□□□□ 0.91
NME9Q86XW9 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.75■□□□□ 0.91
NME9Q86XW9 PPY2P-201ENST00000582808 702 ntBASIC20.75■□□□□ 0.91
NME9Q86XW9 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms